Improve parallel map

This commit is contained in:
Andras Schmelczer 2022-06-28 18:27:07 +02:00
parent cab34de326
commit d9e862af6b
9 changed files with 280 additions and 62 deletions

View file

@ -0,0 +1 @@
from .parallel_map import parallel_map

View file

@ -0,0 +1,62 @@
import os
from math import ceil
from typing import Callable, Iterable, Optional, Sequence, Union
import dill
from ..logger import get_logger
from .parallel_map_configuration import ParallelMapConfiguration
logger = get_logger("parallel_map")
def get_config(
*,
function: Callable,
input_values: Union[Sequence, Iterable],
chunk_length: Optional[int],
concurrency: Optional[int],
) -> ParallelMapConfiguration:
is_input_sequence = hasattr(input_values, "__len__")
if concurrency is None:
concurrency = len(os.sched_getaffinity(0))
assert concurrency >= 1, "At least one mapper process has to be created"
if chunk_length is None:
if is_input_sequence:
chunk_length = max(1, ceil(len(input_values) / concurrency / 10))
else:
raise ValueError(
"The argument for `values` does not implement `__len__`, therefore, you must provide a `chunk_length`"
)
assert chunk_length >= 1, "Chunks have to contain at least one element"
chunk_count: Optional[int] = None
if is_input_sequence:
chunk_count = ceil(len(input_values) / chunk_length)
if chunk_count < concurrency:
logger.warning(
f"Limiting concurrency to {chunk_count} because there are only {chunk_count} chunks"
)
concurrency = chunk_count
if concurrency == 1:
logger.warning("Running in series, there is no reason for parallelism")
input_length = len(input_values) if is_input_sequence else None
serialized_map_function = dill.dumps(function, byref=True, recurse=True)
logger.info("Parallel map: configured ✅")
config = ParallelMapConfiguration(
concurrency=concurrency,
chunk_count=chunk_count,
chunk_length=chunk_length,
input_length=input_length,
serialized_map_function=serialized_map_function,
)
config.pretty_print()
return config

View file

@ -0,0 +1,23 @@
import multiprocessing as mp
import queue
import dill
def mapper_function(
input_queue: mp.Queue,
output_queue: mp.Queue,
should_stop: mp.Event,
serialized_map_function: bytes,
):
map_function = dill.loads(serialized_map_function)
try:
while not should_stop.is_set():
try:
input_chunk = input_queue.get_nowait()
output_chunk = [(i, map_function(v)) for i, v in input_chunk]
output_queue.put(output_chunk)
except queue.Empty:
pass
except KeyboardInterrupt:
return

View file

@ -0,0 +1,140 @@
import multiprocessing as mp
import queue
from typing import (
Callable,
Iterable,
List,
Optional,
Sequence,
Tuple,
TypeVar,
overload,
)
from tqdm.auto import tqdm
from ..chunk import chunk
from .get_config import get_config
from .mapper_function import mapper_function
T = TypeVar("T")
V = TypeVar("V")
@overload
def parallel_map(
function: Callable[[T], V],
input_values: Sequence[T],
*,
chunk_length: Optional[int],
concurrency: Optional[int],
disable_progress_bar: bool,
) -> List[V]:
...
@overload
def parallel_map(
function: Callable[[T], V],
input_values: Iterable[T],
*,
chunk_length: int,
concurrency: Optional[int],
disable_progress_bar: bool,
) -> List[V]:
...
def parallel_map(
function,
input_values,
*,
chunk_length=None,
concurrency=None,
disable_progress_bar=False,
):
config = get_config(
function=function,
input_values=input_values,
chunk_length=chunk_length,
concurrency=concurrency,
)
if config.concurrency == 1:
return [
function(v)
for v in tqdm(
input_values,
desc="Parallel map",
disable=disable_progress_bar,
total=config.input_length,
miniters=1,
)
]
ctx = mp.get_context("spawn")
ctx.freeze_support()
input_queue = ctx.Queue(0 if config.chunk_count is None else config.chunk_count)
output_queue = ctx.Queue(0 if config.chunk_count is None else config.chunk_count)
should_stop = ctx.Event()
processes = [
ctx.Process(
name=f"parallel_map_{i}",
target=mapper_function,
kwargs=dict(
input_queue=input_queue,
output_queue=output_queue,
should_stop=should_stop,
serialized_map_function=config.serialized_map_function,
),
)
for i in range(config.concurrency)
]
for p in processes:
p.start()
progress = tqdm(
desc="Parallel map",
disable=disable_progress_bar,
total=config.input_length,
miniters=1,
)
chunks = iter(chunk(enumerate(input_values), chunk_length=config.chunk_length))
indexed_results: List[Tuple[int, V]] = []
read_input_length = 0
is_iteration_over = False
try:
while not is_iteration_over or len(indexed_results) < read_input_length:
if not is_iteration_over:
try:
next_chunk = next(chunks)
input_queue.put(next_chunk)
read_input_length += len(next_chunk)
except StopIteration:
is_iteration_over = True
try:
result_chunk = output_queue.get_nowait()
indexed_results.extend(result_chunk)
progress.update(len(result_chunk))
except queue.Empty:
pass
should_stop.set()
except KeyboardInterrupt:
for p in processes:
p.terminate()
finally:
for p in processes:
p.join()
p.close()
input_queue.close()
output_queue.close()
progress.close()
results = [v for _, v in sorted(indexed_results)]
return results

View file

@ -0,0 +1,25 @@
from typing import Optional
from pydantic import BaseModel
from ..logger import get_logger
logger = get_logger("parallel_map")
class ParallelMapConfiguration(BaseModel):
concurrency: int
chunk_count: Optional[int]
chunk_length: int
input_length: Optional[int]
serialized_map_function: bytes
def pretty_print(self, prefix=" ⚙️"):
logger.info(f"{prefix} concurrency: {self.concurrency}")
logger.info(f"{prefix} chunk length: {self.chunk_length}")
logger.info(
f"{prefix} chunk count: {self.chunk_count if self.chunk_count else 'unknown'}"
)
logger.info(
f"{prefix} function size: {len(self.serialized_map_function) / 1024:.0f} kB"
)