Refactor

editor/visualisation/plot_histograms_in_3d.py

@@ -0,0 +1,54 @@
+from plotly.subplots import make_subplots
+import plotly.graph_objects as go
+from math import ceil
+from typing import Dict
+import numpy as np
+
+
+def plot_histograms_in_3d(
+    histograms: Dict[str, np.ndarray], histogram_per_row: int = 3
+):
+    cols = min(histogram_per_row, len(histograms))
+    rows = ceil(len(histograms) / histogram_per_row)
+    fig = make_subplots(
+        rows=rows,
+        cols=cols,
+        specs=[[{"type": "scatter3d"} for _ in range(cols)] for _ in range(rows)],
+    )
+    for i, (title, histogram) in enumerate(histograms.items()):
+        fig.add_trace(
+            _get_3d_scatter_plot_from_histogram(title, histogram),
+            row=(i // (histogram_per_row + 1)) + 1,
+            col=(i % histogram_per_row) + 1,
+        )
+    fig.show()
+
+
+def _get_3d_scatter_plot_from_histogram(title, histogram):
+    x, y, z, marker_size = [], [], [], []
+    bins = len(histogram)
+
+    for i, row in enumerate(histogram):
+        for j, col in enumerate(row):
+            for k, value in enumerate(col):
+                if value > 0:
+                    x.append(i)
+                    y.append(j)
+                    z.append(k)
+                    marker_size.append(value)
+
+    return go.Scatter3d(
+        x=x,
+        y=y,
+        z=z,
+        mode="markers",
+        marker=dict(
+            size=[min(20, ms * 10000) for ms in marker_size],
+            color=[
+                f"rgb({xi*256/bins},{yi*256/bins},{zi*256/bins})"
+                for xi, yi, zi in zip(x, y, z)
+            ],
+            opacity=0.8,
+        ),
+        name=title,
+    )